CCRR: Complex Chromosomal Rearrangements Resolver
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Introduction
This web service is designed to facilitate the analysis of complex structural variation events, utilizing your data on structural variants (SVs) and copy number variants (CNVs). It supports input from up to six structural variation analysis tools for SV data, and from up to five tools for CNV data. Our system automatically merges these inputs to generate high-confidence SV and CNV data. Alternatively, you have the option to input your own high-quality SV and CNV data. Following this, our service applies five sophisticated algorithms for the analysis of complex structural variations, offering you the ability to review these results at your convenience.
SV input
From Custom
From Tools
Custom_SV
example
load Example
Delly
example
Manta
example
Gridss
example
lumpy
example
SvABA
example
Soreca
example
CN input
From Custom
From Tools
Custom_CN
example
load Example
Sclust
example
Purple
example
Delly
example
CNVkit
example
Sequenza
example
Options
example result
Maximum Allowed Distance to Infer Identical SV break-ends Across Tools:
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Number of structural variation callers required to reach consensus on a SV event:
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Maximum Allowed Distance to Infer Overlap of CN Change Regions Across Tools:
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Purity:
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Ploidy:
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Gender:
Male
Female
?
Genome Version:
hg19
hg38
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Email (optional):
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